Curriculum
Course:
Bioinformatics Fundamentals
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Curriculum
Bioinformatics Fundamentals
About the Exploring the World of Bioinformatics
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Course Introduction
self-paced
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Module 1: Introduction to Bioinformatics
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Module 1 Overview
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Overview of Bioinformatics
Lesson 1.1
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Practical Exercise 1.1
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Historical Development
Lesson 1.2
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Practical Exercise 1.2
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Importance and Applications of Bioinformatics
Lesson 1.3
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Practical Exercise 1.3
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Case Study: Understanding the Role of Bioinformatics in Precision Medicine
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Quiz
10 questions
Module 2: Biological Data and Databases
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Module 2 Overview
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Types of Biological Data
Lesson 2.1
Practical Exercise 2.1
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Introduction to Biological Databases
Lesson 2.2
Practical Exercise 2.2
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Data Retrieval and Management
Lesson 2.3
Practical Exercise 2.3
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Case Study: Exploration of Metagenomic Data
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Quiz
10 questions
Module 3: Sequence Analysis
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Module 3 Overview
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Sequence Alignment Algorithms
Lesson 3.1
Practical Exercise 3.1
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Pairwise Sequence Alignment
Lesson 3.2
Practical Exercise 3.2
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Multiple Sequence Alignment
Lesson 3.3
Practical Exercise 3.3
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Case Study: Investigating Genetic Variation in a Population
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Quiz
10 questions
Module 4: Genome Analysis
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Module 4 Overview
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Genome Assembly
Lesson 4.1
Practical Exercise 4.1
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Gene Prediction and Annotation
Lesson 4.2
Practical Exercise 4.2
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Comparative Genomics
Lesson 4.3
Practical Exercise 4.3
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Case Study: Genome Analysis in Crop Improvement
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Quiz
10 questions
Module 5: Protein Structure Prediction
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Module 5 Overview
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Protein Structure and Function
Lesson 5.1
Practical Exercise 5.1
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Prediction Methods
Lesson 5.2
Practical Exercise 5.2
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Visualization Tools
Lesson 5.3
Practical Exercise 5.3
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Case Study: Predicting the Structure of a Disease-Associated Protein
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Quiz
10 questions
Module 6: Functional Genomics
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Module 6 Overview
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Gene Expression Analysis
Lesson 6.1
Practical Exercise 6.1
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Microarray Analysis
Lesson 6.2
Practical Exercise 6.2
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RNA Sequencing (RNA-seq)
Lesson 6.3
Practical Exercise 6.3
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Case Study: Understanding Gene Expression Patterns in Cancer
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Quiz
10 questions
Module 7: Phylogenetics
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Module 7 Overview
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Basics of Phylogenetic Analysis
Lesson 7.1
Practical Exercise 7.1
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Construction of Phylogenetic Trees
Lesson 7.2
Practical Exercise 7.2
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Molecular Clock and Evolutionary Analysis
Lesson 7.3
Practical Exercise 7.3
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Case Study: Understanding Evolutionary Relationships Using Phylogenetics
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Quiz
10 questions
Module 8: Metagenomics and Systems Biology
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Module 8 Overview
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Metagenomics Overview
Lesson 8.1
Practical Exercise 8.1
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Microbial Community Analysis
Lesson 8.2
Practical Exercise 8.2
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Systems Biology Approaches
Lesson 8.3
Practical Exercise 8.3
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Case Study: Understanding Gut Microbiota Diversity in Inflammatory Bowel Disease (IBD)
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Quiz
10 questions
Module 9: Bioinformatics Tools and Software
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Module 9 Overview
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Introduction to Bioinformatics Software Packages
Lesson 9.1
Practical Exercise 9.1
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Hands-on Tutorials
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Practical Applications
Lesson 9.3
Practical Exercise 9.3
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Case Study: Leveraging Bioinformatics Tools for Drug Discovery
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Quiz
10 questions
Module 10: Applications of Bioinformatics
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Module 10 Overview
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Pharmacogenomics
Lesson 10.1
Practical Exercise 10.1
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Personalized Medicine
Lesson 10.2
Practical Exercise 10.2
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Agricultural Biotechnology
Lesson 10.3
Practical Exercise 10.3
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Environmental Biology
Lesson 10.4
Practical Exercise 10.4
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Case Study: Leveraging Bioinformatics in Crop Improvement
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Quiz
10 questions
Module 11: Ethical and Legal Issues
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Module 11 Overview
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Privacy and Data Security in Bioinformatics
Lesson 11.1
Practical Exercise 11.1
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Intellectual Property Rights
Lesson 11.2
Practical Exercise11.2
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Ethical Considerations in Bioinformatics Research
Lesson 11.3
Practical Exercise 11.3
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Case Study: Protecting Patient Privacy in Genomic Research
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Quiz
10 questions
Module 12: Future Perspectives
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Module 12 Overview
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Emerging Trends and Technologies
Lesson 12.1
Challenges and Opportunities
Lesson 12.2
Career Opportunities in Bioinformatics
Lesson 12.3
Case Study: Leveraging AI in Drug Discovery
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Quiz
10 questions
Final Assessment and Feedback
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Quiz
10 questions
Capstone Project (Optional)
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Additional Resources
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Implementation Guide
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Practical Tips
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Career Roadmap
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Recommended Resources
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Text lesson
Module 8 Overview
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